Refereed Journals

• N. Medvidovic and C. Mattmann. Leveraging Software Architecture to Reconcile the Promise and Reality of Grid Computing. Infosys Technology Roundtable (TRT) newsletter, September 2009.
• C. Mattmann, D. Freeborn, D. Crichton, J. S. Hughes, P. Ramirez, S. Hardman, D. Woollard, and S. Kelly. Transformation of OODT CAS To Perform Larger Tasks. NASA Tech Briefs, Vol. 32, No. 6, pp. 44, June 2008.
• D. Woollard, N. Medvidovic, Y. Gil, and C. Mattmann. Scientific Software as Workflows: From Discovery to Distribution. IEEE Software – Special Issue on Developing Scientific Software, Vol. 25, No. 4, July/August, 2008.
• J. S. Hughes, D. Crichton, S. Kelly, C. Mattmann, J. Crichton, T. Tran. Intelligent Resource Discovery using Ontology-based Resource Profiles. Data Science Journal, Vol. 4, pp. 171-188, December 2005.
• S. Banerjee, C. Mattmann, N. Medvidovic, L. Golubchik. Leveraging architectural models to inject trust into software systems. ACM SIGSOFT Software Engineering Notes, vol. 30, no. 4, pp. 1-7, July 2005.

Book Chapters

• D. Crichton, C. Mattmann, M. Thornquist, J. S. Hughes, K. Anton. Bioinformatics: Biomarkers of Early Detection. In Translational Pathology of Early Cancer. W. Grizzle, S. Srivastava, eds. IOS Press, 2009, Submitted.

Refereed Conferences and Workshops

• C. Mattmann, A. Braverman, D. Cricthon and, D. Williams. An Architecture and Analysis Environment for Model to Observational Data Intercomparisons. To appear in Proceedings of American Geophysical Union, San Francisco, CA, December 14-18, 2009.
• A. Braverman, S. Granger and C. Mattmann. Service-oriented Architectures and Statistics for Water Resource Analysis. Submitted to 58th Session of the International Statistical Institute, Dublin, Ireland, August 21-26th, 2011.
• A. Braverman, D. Crichton, C. Mattmann, R. Raskin and M. Gunson. The Climate Data eXchange: Bringing NASA's Observational Data to the IPCC Community. In Proceedings of the Workshop on Global Organization for Earth System Science Portals (GO-ESSP), Hamburg, Germany, October 5-9, 2009.
• D. Woollard, C. Mattmann, A. Braverman, R. Raskin, D. Crichton. Enabling Climate Scientists to Access Observational Data. In Proceedings of the OOPSLA 1st International Workshop on Software Research and Climate Change. Orlando, FL, October 26, 2009.
• C. Mattmann, D. Crichton, A. Braverman, D. Williams, M. Gunson, D. Woollard, S. Kelly and M. Cayanan. A Distributed Computing Infrastructure for the Evaluation of Climate Models using NASA Observational Data. To appear in Proceedings of the IEEE ICDM Workshop on Knowledge Discovery from Climate Data, Miami, FL, December 6th, 2009.
• C. Mattmann, J. Garcia, I. Krka, D. Popescu and N. Medvidovic. The Anatomy and Physiology of the Grid Revisited. In Proceedings of the Joint Working IEEE/IFIP Conference on Software Architecture & European Conference on Software Architecture, pp. 285-288, Cambridge, UK, September 14-17, 2009.
• A. Bingham, C. Thompson, T. Stough, M. Henderson, L. Pan, and C. Mattmann. Data Tools and Services at Physical Oceanography DAAC. In Proceedings of OceanObs09, Venice, Italy, September 21st-25th, 2009.
• C. Mattmann, J. Tran, H. Kincaid, D. Crichton, A. Hart, K. Anton, J. Dahlgren, M. Thornquist, D. Stelling, S. Reid, C. Patriotis, and S. Srivastava. The eCAS Model for Scientific Data Warehousing of Biomarker Data. In Proceedings of the 6th EDRN Scientific Workshop, August 2009. Bethesda MD.
• H. Kincaid, A. Hart, K. Anton, C. Patriotis, M. Thornquist, J. Dahlgren, C. Mattmann, D. Crichton and J. Tran. Curation of EDRN Cancer Biomarker Research. In Proceedings of the 6th EDRN Scientific Workshop, August 2009. Bethesda MD.
• D. Crichton, M. Thornquist, S. Kelly, A. Hart, H. Kincaid, C. Mattmann, J. Dahlgren, K. Anton, D. Stelling, G.Warnick, S. Reid, C. Edelstein, J. Tran, C. Patriotis, and S. Srivastava. Providing Integrated Access to Scientific Information and Knowledge in Cancer Biomarker Research. In Proceedings of the 6th EDRN Scientific Workshop, August 2009. Bethesda MD.
• A. Hart, C. Mattmann, J. Tran, D. Crichton, H. Kincaid, J. S. Hughes, S. Kelly, K. Anton, D. Johnsey, C. Patriotis. Enabling Effective Curation of Cancer Biomarker Research Data. In Proceedings of the 22nd IEEE International Symposium on Computer-Based Medical Systems (CBMS), Albuquerque, NM, August 3rd-4th, 2009.
• J. S. Hughes, D. Crichton and C. Mattmann. Ontology-Based Information Model Development for Science Information Reuse and Integration. In Proceedings of the 2009 IEEE International Conference on Information Reuse and Integration(IEEE IRI-09), Las Vegas, NV, August 10th-12th, 2009.
• W. Franklin, D. Crichton, M. Reid, C. Mattmann, A. Hart, D. Deng, P. Chesnut, B. Logue, J. Hayes, D. Stelling, M. Varella-Garcia, T. E. Kennedy, Y. E. Miller. A Distributed Bronchial Mapping Software Tool for the Tracking of Cellular, Molecular and Imaging Results in the Central Airways. In Proceedings of the 13th IASLC World Conference on Lung Cancer, San Francisco, CA, July 31st-August 4th, 2009.
• S. McCleese, C. Mattmann, R. Raskin, D. Crichton, and S. Hardman. A Virtual Oceanographic Data Center. In Proceedings of the 18th ACM/IEEE International World Wide Web Conference (WWW2009) -- Developers Track, pp. 38-39, Madrid, Spain, April 20th-24th, 2009.
• J. S. Hughes, D. Crichton, and C. Mattmann. Scientific Digital Libraries, Interoperability, and Ontologies. In Proceedings of the ACM/IEEE Joint Conference on Digital Libraries (JCDL 2009), pp. 399-400, Austin, TX, June 15-19, 2009.
• D. Woollard, C. Mattmann, and N. Medvidovic. Injecting Software Architectural Constraints into Legacy Scientific Applications. In Proceedings of the ICSE 2009 Workshop on Software Engineering for Computational Science and Engineering, Vancouver, Canada, May 23, 2009.
• J. S. Hughes, D. Crichton and C. Mattmann. A Framework to Manage Information Models - The Planetary Data System Case Study. In Proceedings of the 40th Lunar and Planetary Science Conference, the Woodlands, Texas, March 23-27, 2009.
• C. Mattmann, D. Freeborn, D. Crichton, B. Foster, A. Hart, D. Woollard, S. Hardman, P. Ramirez, S. Kelly, A. Y. Chang, C. E. Miller. A Reusable Process Control System Framework for the Orbiting Carbon Observatory and NPP Sounder PEATE missions. In Proceedings of the 3rd IEEE Intl’ Conference on Space Mission Challenges for Information Technology (SMC-IT 2009), pp. 165-172, July 19 - 23, 2009.
• A. Hart, J. Tran, D. Crichton, K. Anton, H. Kincaid, S.Kelly, J.S. Hughes and C. Mattmann. An Extensible Biomarker Curation Approach and Software Infrastructure for the Early Detection of Cancer. In Proceedings of the IEEE Intl. Conference on Health Informatics , pp. 387-392, Porto, Portugal, January 14-17, 2009.
• D. Crichton, C. Mattmann, A. Braverman. Facilitating Climate Modeling Research and Analysis via the Climate Data eXchange. In Proceedings of the Workshop on Global Organization for Earth System Science Portals (GO-ESSP), Seattle, WA, 2008.
• D. Crichton, P. Ramirez, C. Mattmann and J. S. Hughes. A Model Driven Architecture for Highly Distributed, Data Intensive Systems. In Proceedings of the DARPA Workshop on Digital Object Storage and Retrieval (DOSR), Chantilly, Virginia, July 15-16, 2008.
• C. Mattmann, R. Raskin, D. Crichton. A Service Oriented Architecture for Highly Distributed and Data-Intensive Geospatial Grid Software Systems. In Proceedings of the GIScience 2008 Workshop on Design of Service-Oriented Architecture (SOA) for Geospatial Science, Park City, UT, 2008.
• J. S. Hughes, D. Crichton, C. Mattmann. An Ontology-Based Archive Information Model for the Planetary Science Community. In Proceedings of the 10th International Conference on Space Operations (SpaceOps2008), Heidelberg, Germany, AIAA Press, May 12-16, 2008.
• A. Hart, D. Crichton, D. Johnsey, C. Mattmann, C. Patriotis, H. Kincaid, S. Srivastava, M. Thornquist. A Web-based Data Management Infrastructure for Curation, Annotation and Dissemination of Biomarker Research results for the Early Detection of Cancer. In Proceedings of the 5th EDRN Scientific Workshop, Bethesda, MD, March 17-19, 2008.
• D. Crichton, M. Thornquist,  S. Kelly, C. Mattmann, D. Johnsey, J. Dahlgren, D. Steling, G. Warnick, S. Reid, C. Edelstein, A. Hart, H. Kincaid. A Distributed Informatics Knowledge Environment for Biomarker Research. In Proceedings of the 5th EDRN Scientific Workshop, Bethesda, MD, March 17-19, 2008.
• J. S. Hughes, D. Stelling, D.Crichton, C. Mattmann, G. Warnick, S. Reid. An Information Model for Biomarker Research. In Proceedings of the 5th EDRN Scientific Workshop, Bethesda, MD, March 17-19, 2008.
• C. Mattmann, M. Khilkin, W. Rom, D. Crichton, S. Kelly, P. Rivera, J. Ko, B. Phalan, S. Sotero, E. Eylers. A Reusable Web-based CAT (CT) scan data management system for temporally characterizing Solid Nodules and Ground Glass Opacities in Lung Cancer patients. In Proceedings of the 5th EDRN Scientific Workshop, Bethesda, MD, March 17-19, 2008.
• W. Franklin, D. Crichton, M. Reid, C. Mattmann, A.Hart, D. Deng, B. Logue, J. Hayes, D. Stelling. A Distributed Biomarker Atlas for Lung Research aiding the Discovery and Early Detection of Cancer Biomarkers. In Proceedings of the 5th EDRN Scientific Workshop, Bethesda, MD, March 17-19, 2008.
• C. Mattmann, D. Woollard, N. Medvidovic. Exploiting Connector Knowledge to Efficiently Disseminate Highly Voluminous Data Sets. In Proceedings of the ICSE 2008 Workshop on SHAring and Reusing architectural Knowledge - SHARK 2008, Leipzig, Germany, May 10-18, 2008.
• M. Khilkin, C. Mattmann, P. Rivera, J. Koh, B. Phalan, E. Eylers, S. Kelly, D. Crichton and W. N. Rom. Integrating clinical, CT and PFT patient information in a database to determine a follow-up CT interval and the malignant potential of solid and ground glass pulmonary nodules. In Proceedings of American Thoracic Society (ATS), Toronto, Ontario, Canada, May 16-21, 2008.
• M. Khilkin, C. Mattmann, P. Rivera, J. Koh, B. Phalan, E. Eylers, S. Kelly, D. Crichton and W. N. Rom. An integrated clinical, CT, PFT database to better define an at risk population to screen for lung cancer. In Proceedings of American Thoracic Society (ATS), Toronto, Ontario, Canada, May 16-21, 2008.
• C. Mattmann, V. Perrone, S. Kelly, D. Crichton, A. Finkelstein, and N. Medvidovic. A Reference Framework for Requirements and Architecture in Biomedical Grid Systems. In Proceedings of the 2007 IEEE International Conference on Information Reuse and Integration (IEEE IRI-07), pp. 418-423, Las Vegas, NV, August 13-15th, 2007.
• C. Mattmann, D. Woollard, N. Medvidovic and R. Mahjourian. Software Connector Classification and Selection for Data-intensive Systems. In Proceedings of the ICSE 2007 Workshop on Incorporating COTS Software into Software Systems: Tools and Techniques (IWICSS), Minneapolis, MN, May 22, 2007.
• C. Mattmann and N. Medvidovic. The GridLite DREAM: Bringing the Grid to Your Pocket. In 2006 Monterey Workshop, LNCS 4322, pp. 70-87, 2007.
• J. Bhuta, C. Mattmann, N. Medvidovic, and B. Boehm. A Framework for the Assessment and Selection of Software Components and Connectors in COTS-based Architectures. In Proceedings of the 6th IEEE/IFIP Working Conference on Software Architecture (WICSA07), pg. 6, Mumbai, India, January 6th-9th, 2007.
• D. Crichton, S. Kelly, C. Mattmann, Q. Xiao, J. S. Hughes, J. Oh, M. Thornquist, D. Johnsey, S. Srivastava, L. Esserman, and B. Bigbee. A Distributed Information Services Architecture to Support Biomarker Discovery in Early Detection of Cancer. In Proceedings of the 2nd IEEE International Conference on e-Science and Grid Computing, pp. 44, Amsterdam, the Netherlands, December 4th-6th, 2006.
• C. Mattmann. Software Connectors for Highly Distributed and Voluminous Data-intensive Systems. In Proceedings of the Doctoral Symposium at the 21st IEEE/ACM International Conference on Automated Software Engineering (ASE06), pp. 331-334, Tokyo, Japan, September 18-22, 2006.
• C. Mattmann, S. Kelly, D. Crichton, J. S. Hughes, S. Hardman, R. Joyner and P. Ramirez. A Classification and Evaluation of Data Movement Technologies for the Delivery of Highly Voluminous Scientific Data Products. In Proceedings of the NASA/IEEE Conference on Mass Storage Systems and Technologies (MSST2006), pp. 131-135, College Park, Maryland, May 15-18, 2006
• J. S. Hughes, D. Crichton, P. Ramirez and C. Mattmann. Data Model Management for Space Information Systems. In Proceedings of the 9th International Conference on Space Operations (SpaceOps-2006), AIAA press, Rome, Italy, June 2006.
• C. Mattmann, D. Crichton, J. S. Hughes, P. Ramirez and D. Berrios. A Reference Architecture for Space Information Management. In Proceedings of the 9th International Conference on Space Operations (SpaceOps-2006), AIAA Press, Rome, Italy, June 2006.
• C. Mattmann, D. Crichton, N. Medvidovic and S. Hughes. A Software Architecture-Based Framework for Highly Distributed and Data Intensive Scientific Applications. In Proceedings of the 28th International Conference on Software Engineering (ICSE06), pp. 721-730, Shanghai, China, May 20th-28th, 2006.
• N. Medvidovic and C. Mattmann. The GridLite DREAM: Bringing the Grid to Your Pocket. In Proceedings of the Monterey Workshop on Networked Systems, Irvine, CA, September, 2005.
• J. Steven Hughes, D. Crichton, S. Kelly and C. Mattmann. The Semantic Planetary Data System. In Proceedings of the 3rd Symposium on Ensuring Long-term Preservation and Adding Value to Scientific and Technical Data (PV-2005), The Royal Society, Edinburgh, UK, November 21-23, 2005.
• S. Banerjee, C. Mattmann, N. Medvidovic and L. Golubchik. Leveraging Architectural Models to Inject Trust into Software Systems. In Proceedings of the ICSE 2005 Workshop on Software Engineering for Secure Systems -- Building Trustworthy Applications (SESS05), St. Louis, Missouri, May 15th-16th, 2005.
• C. Mattmann, N. Medvidovic, P. Ramirez and V. Jakobac. Unlocking the Grid. In Proceedings of the 8th ACM SIGSOFT International Symposium on Component-based Software Engineering (CBSE8), pp. 322-336, St. Louis, Missouri, May 14th-15th, 2005.
• C. Mattmann, S. Malek, N. Beckman, M. Mikic-Rakic, N. Medvidovic and D. Crichton. GLIDE: A Grid-based, Lightweight, Infrastructure for Data-intensive Environments. In Proceedings of the European Grid Conference (EGC2005), pp. 68-77. Amsterdam, the Netherlands, February 14th-16th, 2005.
• P. Ramirez and C. Mattmann. ACE: Improving Search Engines via Automatic Concept Extraction. In Proceedings of the 2004 IEEE International Conference on Information Reuse and Integration (IEEE-IRI 2004), pp. 229-234. Las Vegas, Nevada, USA. November 8th-10th, 2004.
• J. S. Hughes, D. Crichton, S. Kelly, C. Mattmann, R. Joyner, J. Wilf and J. Crichton. A Planetary Data System for the 2006 Mars Reconnaisance Orbiter Era and Beyond. In Proceedings of the 2nd ESA Symposium on Ensuring the Long Term Preservation and Adding Value to Scientific and Technical Data (PV-2004), Frascati, Italy, October 5th-7th, 2004.
• R. Raskin, M. Pan and C. Mattmann. Enabling Semantic Interoperability for Earth Science Data. 4th NASA Earth Science Technology Conference. Palo Alto, CA June 22-24th, 2004.
• C. Mattmann, D. Crichton, J. S. Hughes, S. Kelly and P. Ramirez. Software Architecture for Large-scale, Distributed, Data-Intensive Systems. In Proceedings of the 4th Working IEEE/IFIP Conference on Software Architecture (WICSA-4). Oslo, Norway, June 12th-15th, 2004.
• C. Mattmann, P. Ramirez, D. Crichton and J.S. Hughes. Packaging Data Products using Data Grid Middleware for Deep Space Mission Systems. In Proceedings of the 8th International Conference on Space Operations (Spaceops-2004). Montreal, Canada, May 17th-21st, 2004.
• C. Mattmann, D. Freeborn and D. Crichton. Towards a Distributed Information Architecture for Avionics Data. In Proceedings of the 2nd IADIS International Conference on WWW/Internet, Algarve, Portugal, November 5th-8th, 2003.
• C. Mattmann and B. Shaw. Adding Meta-Architectural Understanding to Resource Aware Software Architectures Requiring Device Synchronization. In Proceedings of the 2nd IADIS International Conference on WWW/Internet, Algarve, Portugal, November 5th-8th, 2003.
• S. Mandutianu, S. Hardman and C. Mattmann. DIRAC: A Framework for Coordination and Cooperation. Poster Session. ACM/IFIP/USENIX International Middleware Conference, Rio de Janeiro, Brazil, 2003.

Technical Reports

• C. Mattmann, B. Foster, A. Y. Chang, P. Ramirez, D. Freeborn, D. Woollard, D. Crichton. A Framework for Rapidly Integrating Science Data Processing Algorithms into Process Control Systems. NASA New Technology Report (NTR) NPO-47160, 2009.
• C. Mattmann, J. Garcia, I. Krka, D. Popescu and N. Medvidovic. The Anatomy and Physiology of the Grid Revisited. Technical Report, USC-CSSE-2008-820. Center for Software Engineering, University of Southern California, October 2008.
• C. Mattmann, B. Foster, A. Chang, D. Crichton, D. Freeborn, D. Woollard. A Generic, Extensible, Configurable Push Pull Framework for Large Scale Science Missions. NASA New Technology Report (NTR) NPO-46185, 2008.
• C. Mattmann, D. Freeborn, D. Crichton, J. S. Hughes, P. Ramirez, S. Hardman, D. Woollard, and S. Kelly. Refining and Improving the OODT Catalog and Archive Service via Agile Component Refactoring. NASA New Technology Report (NTR) NPO-44883, 2007.
• V. Perrone, C. Mattmann, S. Kelly, D. Crichton, A. Finkelstein, and N. Medvidovic. A Reference Framework for Requirements and Architecture in Biomedical Grid Systems. USC Center for Software Engineering Technical Report, USC-CSE-2007-706, March 2007.
• D. Woollard, C. Mattmann, and N. Medvidovic. Injecting Software Architectural Constraints into Legacy Scientific Applications. USC Center for Software Engineering Technical Report, USC-CSE-2007-701, January 2007.
• J. Bhuta, C. Mattmann, N. Medvidovic, and B. Boehm. A Framework for the Assessment and Selection of Software Components and Connectors in COTS-based Architectures. USC Center for Software Engineering Technical Report, USC-CSE-2006-615, September 2006.
• C. Mattmann. Software Connectors for Highly Distributed and Voluminous Data-intensive Systems. USC Center for Software Engineering Technical Report (Qualifying Exam Report), USC-CSE-2006-600, January 2006.
• C. Mattmann, N. Medvidovic, P. Ramirez and V. Jakobac. Unlocking the Grid. USC Center for Software Engineering Technical Report, USC-CSE-2004-512, December 2004.
• C. Mattmann, S. Malek, N. Beckman, M. Mikic-Rakic, N. Medvidovic and D. Crichton. GLIDE: A Grid-based, Ligthweight, Infrastructure for Data-intensive Environments. USC Center for Software Engineering Technical Report, USC-CSE-2004-509, August 2004.
• C. Mattmann and P. Ramirez. A Comparison and Evaluation of Architecture Recovery in Data-intensive systems using Focus. USC Center for Software Engineering Technical Report, USC-CSE-2004-507, May 2004.
• C. Mattmann and P. Ramirez. Intelligent Coordinates and Collective Intelligence: A Case study in Improving Simulated Annealing in the Bin-packing Domain. USC Computer Science Technical Report, USC-03-798, December 2003.

Review Articles

• C. Mattmann. Review of: Journal on Data Semantics XII. ACM Computing Reviews, Review #: CR137473, November 2009.
  
• C. Mattmann. Review of: Pro Hadoop. ACM Computing Reviews, Review #: CR137448, November 2009.
• C. Mattmann. Review of: Database and information-retrieval methods for knowledge discovery. ACM Computing Reviews, Review #: CR136803, May 2009.
• C. Mattmann. Review of: Better scripts, better games. ACM Computing Reviews, Review #: CR136725, April 2009. .
• C. Mattmann. Review of: Software Engineering and Formal Methods. ACM Computing Reviews, Review #: CR135087 , October 2008.
• C. Mattmann. Review of: Constraint logic programming using ECLiPSe. ACM Computing Reviews, Review #: CR135844, July 2008.
• C. Mattmann. Review of: Composition inference for UML class diagrams. ACM Computing Reviews, Review #: CR135556, May 2008.
• C. Mattmann. Review of: MapReduce: simplified data processing on large clusters. ACM Computing Reviews, Review #: CR135329, March 2008.
• C. Mattmann. Review of: Smart card applications: Design models for using and programming smart cards. ACM Computing Reviews, Review #: CR135205, February 2008.
• C. Mattmann. Review of: Quality, productivity and economic benefits of software reuse: a review of industrial studies. ACM Computing Reviews, Review #: CR135087, January 2008.